EnhancerDB
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  3. rs117542840[chr14:103004570]
Enhancers that have rs117542840[chr14:103004570]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 102988165 103029255 enh3463
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs117542840[chr14:103004570]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 103003831 103004638 ZNF143 GTRD no Epithelial (MCF-7) 21642061
chr14 103003842 103004997 ZNF143 GTRD no Epithelial (MCF-7) 21642062
chr14 103003848 103004844 ZNF143 GTRD no Epithelial (MCF-7) 21642063
chr14 103003871 103004991 ZNF143 GTRD no Epithelial (MCF-7) 21642064
chr14 103004327 103005011 ZNF143 GTRD no Epithelial (MCF-7) 21642069
chr14 103004377 103004996 ZNF143 GTRD no Epithelial (MCF-7) 21642070
chr14 103004557 103004572 ZIC3 JASPAR yes 117909248
chr14 103004557 103004572 ZIC4 JASPAR yes 117909249
chr14 103004558 103004572 GLIS2 JASPAR yes 117909250
chr14 103004558 103004572 ZIC1 JASPAR yes 117909251
chr14 103004562 103004572 ZNF740 JASPAR yes 117909252
chr14 103004562 103004574 ZBTB7B JASPAR yes 117909253
chr14 103004567 103004585 RARA JASPAR yes 117909254
Genes associated with rs117542840[chr14:103004570], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More