EnhancerDB
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  3. rs117550540[chr6:43870127]
Enhancers that have rs117550540[chr6:43870127]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43862322 43897815 enh23256
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs117550540[chr6:43870127]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43870121 43870127 ETS1 JASPAR yes 101800311
chr6 43870121 43870127 SPI1 JASPAR yes 101800312
chr6 43870125 43870142 PAX1 JASPAR yes 101800313
chr6 43870125 43870142 PAX9 JASPAR yes 101800314
chr6 43870126 43870145 PAX5 JASPAR yes 101800315
Genes associated with rs117550540[chr6:43870127], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More