EnhancerDB
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  3. rs117620172[chr13:111050814]
Enhancers that have rs117620172[chr13:111050814]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 111037685 111076655 enh15498
Brain (SK-N-MC) Liver Pancreas Uterus Kidney Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117620172[chr13:111050814]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 111049518 111051606 ZNF143 GTRD no Epithelial (MCF-7) 21605208
chr13 111049518 111051606 ZNF143 GTRD no Epithelial (MCF-7) 108089338
chr13 111049568 111051707 ZNF143 GTRD no Epithelial (MCF-7) 21605209
chr13 111049568 111051707 ZNF143 GTRD no Epithelial (MCF-7) 108089339
chr13 111049810 111051034 ZBTB33 GTRD no Lung (A549) 108089341
chr13 111049909 111051062 ZNF274 GTRD no Cervix (HeLa-S3) 21605213
chr13 111049909 111051062 ZNF274 GTRD no Cervix (HeLa-S3) 108089348
chr13 111049988 111050932 ZBTB33 GTRD no Lung (A549) 108089353
chr13 111049994 111050859 ZNF274 GTRD no Blood (GM12878) 108089354
chr13 111049998 111050822 ZNF274 GTRD no Blood (GM12878) 108089355
chr13 111050019 111050923 ZNF274 GTRD no Bone Marrow (K562) 108089357
chr13 111050045 111050852 ZBTB33 GTRD no Lung (A549) 108089359
chr13 111050094 111050952 ZNF274 GTRD no Cervix (HeLa-S3) 21605217
chr13 111050094 111050952 ZNF274 GTRD no Cervix (HeLa-S3) 108089362
chr13 111050153 111050936 ZNF274 GTRD no Blood (GM12878) 108089371
chr13 111050205 111050862 ZNF274 GTRD no Bone Marrow (K562) 108089379
chr13 111050269 111051768 ZNF274 GTRD no Blood (GM12878) 108089386
chr13 111050384 111050910 ZNF274 GTRD no Blood (GM12878) 108089399
chr13 111050814 111050818 ESR1 TRANSFAC yes 60347796
Genes associated with rs117620172[chr13:111050814], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More