EnhancerDB
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  3. rs117629920[chr12:52673527]
Enhancers that have rs117629920[chr12:52673527]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52669305 52679150 enh14728
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs117629920[chr12:52673527]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52673448 52675850 POLR2A UCSC Txn Factor no Conserved 108033834
chr12 52673448 52675850 POLR2A UCSC Txn Factor no Conserved 108033835
chr12 52673526 52673547 IRF1 JASPAR yes 120934204
chr12 52673527 52673532 TFAP2A TRANSFAC yes 120934205
chr12 52673527 52673533 MZF1 JASPAR yes 120934206
chr12 52673527 52673548 ZNF263 JASPAR yes 120934207
Genes associated with rs117629920[chr12:52673527], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More