EnhancerDB
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  3. rs117682729[chr12:125175799]
Enhancers that have rs117682729[chr12:125175799]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125156845 125176489 enh15094
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117682729[chr12:125175799]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125175433 125176078 ZNF274 GTRD no Bone Marrow (K562) 21581744
chr12 125175501 125175987 ZNF274 GTRD no Bone Marrow (K562) 21581745
chr12 125175521 125176027 ZNF274 GTRD no Cervix (HeLa-S3) 21581746
chr12 125175545 125176028 ZNF274 GTRD no Bone Marrow (K562) 21581747
chr12 125175554 125176014 ZNF274 GTRD no Bone Marrow (K562) 21581748
chr12 125175570 125175866 ZNF274 GTRD no Liver (HepG2) 21581749
chr12 125175572 125175858 TCF7L2 GTRD no Colon (HCT116) 21581750
chr12 125175588 125176009 ZNF274 GTRD no Bone Marrow (K562) 21581751
chr12 125175671 125175855 ZNF274 GTRD no Liver (HepG2) 21581752
chr12 125175784 125175799 FOXP1 JASPAR yes 124409382
chr12 125175785 125175800 FOXA1 JASPAR yes 124409384
chr12 125175793 125175799 SOX10 JASPAR yes 124409392
chr12 125175796 125175807 CDX2 JASPAR yes 124409393
chr12 125175797 125175808 HOXA10 JASPAR yes 124409394
chr12 125175797 125175808 HOXC11 JASPAR yes 124409395
chr12 125175797 125175808 HOXC12 JASPAR yes 124409396
chr12 125175797 125175808 HOXD12 JASPAR yes 124409397
chr12 125175798 125175807 CDX1 JASPAR yes 124409398
chr12 125175798 125175808 HOXC10 JASPAR yes 124409399
chr12 125175798 125175808 HOXD11 JASPAR yes 124409400
Genes associated with rs117682729[chr12:125175799], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More