EnhancerDB
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  3. rs117686639[chr12:65015407]
Enhancers that have rs117686639[chr12:65015407]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65008245 65038815 enh2404
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs117686639[chr12:65015407]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65014523 65015429 P63 GTRD no Skin (Keratinocyte) 108041768
chr12 65014625 65015497 P63 GTRD no Skin (Keratinocyte) 108041769
chr12 65014870 65016352 ZNF274 GTRD no Liver (HepG2) 21552794
chr12 65014870 65016352 ZNF274 GTRD no Liver (HepG2) 108041778
chr12 65014903 65015419 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21552796
chr12 65014903 65015419 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108041780
chr12 65015215 65015735 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21552814
chr12 65015215 65015735 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108041800
chr12 65015397 65015408 NRF1 JASPAR yes 121416843
Genes associated with rs117686639[chr12:65015407], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More