EnhancerDB
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  3. rs117728397[chr5:171396984]
Enhancers that have rs117728397[chr5:171396984]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171376799 171400275 enh8875
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Muscle (A673)
Transcript factors that have rs117728397[chr5:171396984]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171396977 171396992 STAT1 JASPAR yes 67752313
chr5 171396979 171396990 STAT1 JASPAR yes 67752314
Genes associated with rs117728397[chr5:171396984], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More