EnhancerDB
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  3. rs117729709[chr17:39808542]
Enhancers that have rs117729709[chr17:39808542]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39800139 39815735 enh17152
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Lung (A549) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs117729709[chr17:39808542]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39808535 39808555 RREB1 JASPAR yes 54268685
chr17 39808538 39808558 RREB1 JASPAR yes 54268686
chr17 39808541 39808547 YY1 JASPAR yes 54268687
Genes associated with rs117729709[chr17:39808542], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More