EnhancerDB
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  3. rs117801697[chr12:125033820]
Enhancers that have rs117801697[chr12:125033820]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125019933 125050377 enh2674
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr12 125033431 125034089 vista15293
VISTA
Transcript factors that have rs117801697[chr12:125033820]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125031996 125033858 ZNF143 GTRD no Epithelial (MCF-7) 21581013
chr12 125031996 125033858 ZNF143 GTRD no Epithelial (MCF-7) 108068905
chr12 125033448 125034044 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21581017
chr12 125033448 125034044 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108068910
chr12 125033620 125033930 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21581018
chr12 125033620 125033930 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108068911
chr12 125033820 125033825 SP1 TRANSFAC yes 82495933
chr12 125033820 125033825 SP1 TRANSFAC yes 124392613
Genes associated with rs117801697[chr12:125033820], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More