EnhancerDB
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  3. rs117809596[chr1:172895672]
Enhancers that have rs117809596[chr1:172895672]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172893305 172912815 enh12378
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Stomach Muscle (A673) Placenta Muscle (Myoblast) Spleen Uterus Heart
Transcript factors that have rs117809596[chr1:172895672]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172892618 172896771 ZNF274 GTRD no Cervix (HeLa-S3) 21350494
chr1 172892890 172896337 ZNF274 GTRD no Bone Marrow (K562) 21350501
chr1 172894781 172896521 ZNF274 GTRD no Cervix (HeLa-S3) 21350534
chr1 172894815 172896688 ZNF274 GTRD no Cervix (HeLa-S3) 21350535
chr1 172894934 172896615 ZNF274 GTRD no Cervix (HeLa-S3) 21350537
chr1 172894989 172896444 ZNF274 GTRD no Cervix (HeLa-S3) 21350538
chr1 172895008 172896634 ZNF274 GTRD no Cervix (HeLa-S3) 21350539
chr1 172895015 172896523 ZNF274 GTRD no Cervix (HeLa-S3) 21350540
chr1 172895129 172896187 ZBTB33 GTRD no Brain (SK-N-SH) 21350542
chr1 172895611 172896485 ZNF274 GTRD no Cervix (HeLa-S3) 21350544
chr1 172895619 172896168 ZBTB33 GTRD no Brain (SK-N-SH) 21350545
chr1 172895625 172896250 ZNF143 GTRD no Epithelial (MCF-7) 21350546
chr1 172895630 172896317 ZBTB33 GTRD no Brain (SK-N-SH) 21350547
chr1 172895632 172896135 ZNF143 GTRD no Epithelial (MCF-7) 21350548
chr1 172895633 172896673 ZNF274 GTRD no Cervix (HeLa-S3) 21350549
chr1 172895658 172896203 ZNF143 GTRD no Epithelial (MCF-7) 21350550
chr1 172895671 172895674 MYB TRANSFAC yes 33167074
Genes associated with rs117809596[chr1:172895672], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More