EnhancerDB
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  3. rs117812186[chr17:62702524]
Enhancers that have rs117812186[chr17:62702524]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62688405 62713087 enh17300
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117812186[chr17:62702524]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62699237 62712934 ZNF143 GTRD no Epithelial (MCF-7) 21779174
chr17 62699237 62712934 ZNF143 GTRD no Epithelial (MCF-7) 108282599
chr17 62699237 62712934 ZNF143 GTRD no Epithelial (MCF-7) 108282600
chr17 62700302 62707777 ZNF143 GTRD no Epithelial (MCF-7) 21779181
chr17 62700302 62707777 ZNF143 GTRD no Epithelial (MCF-7) 108282601
chr17 62700302 62707777 ZNF143 GTRD no Epithelial (MCF-7) 108282602
chr17 62700673 62705327 ZNF143 GTRD no Epithelial (MCF-7) 21779189
chr17 62700673 62705327 ZNF143 GTRD no Epithelial (MCF-7) 108282603
chr17 62700673 62705327 ZNF143 GTRD no Epithelial (MCF-7) 108282604
chr17 62701017 62705087 TCF7L2 GTRD no Colon (HCT116) 21779206
chr17 62701017 62705087 TCF7L2 GTRD no Colon (HCT116) 108282605
chr17 62701626 62705884 ZNF143 GTRD no Epithelial (MCF-7) 21779211
chr17 62701626 62705884 ZNF143 GTRD no Epithelial (MCF-7) 108282606
chr17 62701626 62705884 ZNF143 GTRD no Epithelial (MCF-7) 108282607
chr17 62702052 62704982 TCF7L2 GTRD no Colon (HCT116) 21779214
chr17 62702052 62704982 TCF7L2 GTRD no Colon (HCT116) 108282608
chr17 62702147 62704966 TCF7L2 GTRD no Colon (HCT116) 21779215
chr17 62702147 62704966 TCF7L2 GTRD no Colon (HCT116) 108282609
chr17 62702192 62702656 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21779216
chr17 62702250 62702626 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21779217
chr17 62702330 62708269 ZNF143 GTRD no Epithelial (MCF-7) 21779219
chr17 62702330 62708269 ZNF143 GTRD no Epithelial (MCF-7) 108282610
chr17 62702330 62708269 ZNF143 GTRD no Epithelial (MCF-7) 108282611
chr17 62702370 62702640 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21779220
chr17 62702420 62705874 ZNF143 GTRD no Epithelial (MCF-7) 21779221
chr17 62702420 62705874 ZNF143 GTRD no Epithelial (MCF-7) 108282612
chr17 62702420 62705874 ZNF143 GTRD no Epithelial (MCF-7) 108282613
chr17 62702485 62705095 TCF7L2 GTRD no Colon (HCT116) 21779222
chr17 62702485 62705095 TCF7L2 GTRD no Colon (HCT116) 108282614
chr17 62702507 62707916 ZNF143 GTRD no Epithelial (MCF-7) 21779223
chr17 62702507 62707916 ZNF143 GTRD no Epithelial (MCF-7) 108282615
chr17 62702507 62707916 ZNF143 GTRD no Epithelial (MCF-7) 108282616
chr17 62702510 62702524 MTF1 JASPAR yes 55314430
chr17 62702519 62702534 HNF4G JASPAR yes 55314431
chr17 62702520 62702534 NR2F1 JASPAR yes 55314432
chr17 62702520 62702535 HNF4A JASPAR yes 55314433
chr17 62702521 62708070 ZNF143 GTRD no Epithelial (MCF-7) 21779224
chr17 62702521 62708070 ZNF143 GTRD no Epithelial (MCF-7) 108282617
chr17 62702521 62708070 ZNF143 GTRD no Epithelial (MCF-7) 108282618
Genes associated with rs117812186[chr17:62702524], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More