EnhancerDB
  1. Home
  2. SNP
  3. rs117827861[chr17:55617890]
Enhancers that have rs117827861[chr17:55617890]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs117827861[chr17:55617890]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55617876 55617890 RORA JASPAR yes 54966585
chr17 55617877 55617893 SRF JASPAR yes 54966587
chr17 55617877 55617895 SRF JASPAR yes 54966588
chr17 55617878 55617890 SRF JASPAR yes 54966589
Genes associated with rs117827861[chr17:55617890], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More