EnhancerDB
  1. Home
  2. SNP
  3. rs117841556[chr19:13948354]
Enhancers that have rs117841556[chr19:13948354]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117841556[chr19:13948354]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13946403 13948393 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851698
chr19 13948349 13948360 USF1 JASPAR yes 112536281
chr19 13948349 13948360 USF2 JASPAR yes 112536282
chr19 13948350 13948357 USF2 TRANSFAC yes 112536283
chr19 13948350 13948360 SREBF2 JASPAR yes 112536284
chr19 13948352 13948357 USF2 TRANSFAC yes 112536285
Genes associated with rs117841556[chr19:13948354], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More