EnhancerDB
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  3. rs117853400[chr17:59401331]
Enhancers that have rs117853400[chr17:59401331]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs117853400[chr17:59401331]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59401319 59401331 E2F8 JASPAR yes 55148449
chr17 59401320 59401331 E2F1 JASPAR yes 55148450
chr17 59401321 59401332 E2F4 JASPAR yes 55148452
chr17 59401321 59401332 E2F6 JASPAR yes 55148453
Genes associated with rs117853400[chr17:59401331], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More