EnhancerDB
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  3. rs117860398[chr6:111872021]
Enhancers that have rs117860398[chr6:111872021]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 111869465 111876495 enh23513
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 111871688 111876668 vista1487
VISTA
Transcript factors that have rs117860398[chr6:111872021]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 111872020 111872035 FOXP1 JASPAR yes 22274648
chr6 111872020 111872035 FOXP1 JASPAR yes 104353111
chr6 111872021 111872042 IRF1 JASPAR yes 22274649
chr6 111872021 111872042 IRF1 JASPAR yes 104353112
Genes associated with rs117860398[chr6:111872021], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More