EnhancerDB
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  3. rs117885404[chr17:59384007]
Enhancers that have rs117885404[chr17:59384007]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs117885404[chr17:59384007]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59383987 59384008 REST JASPAR yes 55146106
chr17 59383991 59384007 ZNF143 JASPAR yes 55146108
chr17 59383991 59384011 TP53 JASPAR yes 55146109
chr17 59383993 59384013 TP63 JASPAR yes 55146112
chr17 59383994 59384012 TP53 JASPAR yes 55146113
chr17 59383994 59384012 TP73 JASPAR yes 55146114
chr17 59384001 59384021 TP53 JASPAR yes 55146115
Genes associated with rs117885404[chr17:59384007], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More