EnhancerDB
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  3. rs117893578[chr12:65015708]
Enhancers that have rs117893578[chr12:65015708]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65008245 65038815 enh2404
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs117893578[chr12:65015708]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65014870 65016352 ZNF274 GTRD no Liver (HepG2) 21552794
chr12 65014870 65016352 ZNF274 GTRD no Liver (HepG2) 108041778
chr12 65015215 65015735 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21552814
chr12 65015215 65015735 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108041800
chr12 65015692 65015712 RREB1 JASPAR yes 121416877
chr12 65015696 65015716 RREB1 JASPAR yes 121416880
chr12 65015700 65015710 SREBF1 JASPAR yes 121416881
chr12 65015708 65015723 FOXP1 JASPAR yes 121416882
Genes associated with rs117893578[chr12:65015708], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More