EnhancerDB
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  3. rs117902038[chr16:85598384]
Enhancers that have rs117902038[chr16:85598384]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117902038[chr16:85598384]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85598015 85598485 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21729315
chr16 85598016 85598456 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729316
chr16 85598055 85598425 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729318
chr16 85598060 85598936 TCF7L2 GTRD no Colon (HCT116) 21729319
chr16 85598062 85599177 ZNF143 GTRD no Epithelial (MCF-7) 21729320
chr16 85598064 85598454 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729321
chr16 85598073 85598429 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729322
chr16 85598090 85598400 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21729324
chr16 85598185 85598684 ZNF274 GTRD no Bone Marrow (K562) 21729335
chr16 85598201 85598999 TCF7L2 GTRD no Colon (HCT116) 21729337
chr16 85598366 85598387 ZNF263 JASPAR yes 12077206
chr16 85598379 85598385 ETS1 JASPAR yes 12077208
chr16 85598379 85598385 SPI1 JASPAR yes 12077209
Genes associated with rs117902038[chr16:85598384], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More