EnhancerDB
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  3. rs117905932[chr12:125033542]
Enhancers that have rs117905932[chr12:125033542]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125019933 125050377 enh2674
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr12 125033431 125034089 vista15293
VISTA
Transcript factors that have rs117905932[chr12:125033542]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125031996 125033858 ZNF143 GTRD no Epithelial (MCF-7) 21581013
chr12 125031996 125033858 ZNF143 GTRD no Epithelial (MCF-7) 108068905
chr12 125032378 125033631 ZNF143 GTRD no Epithelial (MCF-7) 21581014
chr12 125032378 125033631 ZNF143 GTRD no Epithelial (MCF-7) 108068906
chr12 125033348 125033624 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21581015
chr12 125033348 125033624 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108068908
chr12 125033385 125033629 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21581016
chr12 125033385 125033629 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108068909
chr12 125033448 125034044 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21581017
chr12 125033448 125034044 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108068910
Genes associated with rs117905932[chr12:125033542], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 124456392 124499986 + ZNF664 ENSG00000179195.11 124456392 533556 Stomach 0.272778 12677