EnhancerDB
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  3. rs117906060[chr17:38664742]
Enhancers that have rs117906060[chr17:38664742]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117906060[chr17:38664742]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38664739 38664743 YY1 TRANSFAC yes 54219012
chr17 38664740 38664761 IRF1 JASPAR yes 54219013
chr17 38664742 38664757 PRDM1 JASPAR yes 54219014
chr17 38664742 38664757 STAT2 JASPAR yes 54219015
Genes associated with rs117906060[chr17:38664742], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More