EnhancerDB
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  3. rs117935890[chr17:55495278]
Enhancers that have rs117935890[chr17:55495278]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117935890[chr17:55495278]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55495273 55495283 BARHL2 JASPAR yes 54953111
chr17 55495275 55495279 YY1 TRANSFAC yes 54953112
chr17 55495278 55495289 FOXC1 JASPAR yes 54953113
Genes associated with rs117935890[chr17:55495278], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More