EnhancerDB
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  3. rs117937405[chr1:201425793]
Enhancers that have rs117937405[chr1:201425793]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201414985 201433510 enh875
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117937405[chr1:201425793]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201425529 201426253 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856189
chr1 201425779 201425794 PRDM1 JASPAR yes 34495579
chr1 201425780 201425801 ZNF263 JASPAR yes 34495580
chr1 201425782 201425799 RXRA JASPAR yes 34495581
chr1 201425782 201425803 ZNF263 JASPAR yes 34495582
chr1 201425783 201425804 ZNF263 JASPAR yes 34495583
chr1 201425789 201425794 SP1 TRANSFAC yes 34495584
chr1 201425790 201425800 ZNF740 JASPAR yes 34495585
chr1 201425791 201425806 NR2C2 JASPAR yes 34495586
chr1 201425792 201425802 SP1 JASPAR yes 34495587
chr1 201425793 201425802 SP1 TRANSFAC yes 34495588
chr1 201425793 201425803 SP1 JASPAR yes 34495589
Genes associated with rs117937405[chr1:201425793], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More