EnhancerDB
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  3. rs117957046[chr17:55616473]
Enhancers that have rs117957046[chr17:55616473]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs117957046[chr17:55616473]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55616463 55616473 HOXA13 JASPAR yes 54966366
chr17 55616463 55616473 HOXB13 JASPAR yes 54966367
chr17 55616463 55616473 HOXD13 JASPAR yes 54966368
chr17 55616464 55616473 CDX1 JASPAR yes 54966369
chr17 55616466 55616476 MZF1 JASPAR yes 54966370
chr17 55616469 55616474 TFAP2A TRANSFAC yes 54966371
chr17 55616469 55616475 MZF1 JASPAR yes 54966372
chr17 55616471 55616476 ETS2 TRANSFAC yes 54966373
Genes associated with rs117957046[chr17:55616473], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More