EnhancerDB
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  3. rs117962488[chr12:125160839]
Enhancers that have rs117962488[chr12:125160839]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125156845 125176489 enh15094
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 125160747 125161145 vista15313
VISTA
Transcript factors that have rs117962488[chr12:125160839]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125160515 125160932 ZNF274 GTRD no Cervix (HeLa-S3) 21581581
chr12 125160515 125160932 ZNF274 GTRD no Cervix (HeLa-S3) 108069286
chr12 125160538 125160903 TCF7L2 GTRD no Colon (HCT116) 21581582
chr12 125160538 125160903 TCF7L2 GTRD no Colon (HCT116) 108069288
chr12 125160578 125160914 ZNF274 GTRD no Bone Marrow (K562) 21581583
chr12 125160578 125160914 ZNF274 GTRD no Bone Marrow (K562) 108069289
chr12 125160824 125160839 NFYB JASPAR yes 82496791
chr12 125160824 125160839 NFYB JASPAR yes 124407214
chr12 125160827 125160845 NFYA JASPAR yes 82496792
chr12 125160827 125160845 NFYA JASPAR yes 124407215
Genes associated with rs117962488[chr12:125160839], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More