EnhancerDB
  1. Home
  2. SNP
  3. rs117967516[chr1:21651650]
Enhancers that have rs117967516[chr1:21651650]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21624465 21668955 enh110
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 21650806 21651685 vista668
VISTA
Transcript factors that have rs117967516[chr1:21651650]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21649617 21651939 ZNF143 GTRD no Epithelial (MCF-7) 107802351
chr1 21649617 21651939 ZNF143 GTRD no Epithelial (MCF-7) 107802352
chr1 21651639 21651654 FOXP1 JASPAR yes 27296416
chr1 21651639 21651654 FOXP1 JASPAR yes 118245888
chr1 21651646 21651652 HiNF-A TRANSFAC yes 27296417
chr1 21651646 21651652 HiNF-A TRANSFAC yes 118245889
Genes associated with rs117967516[chr1:21651650], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More