EnhancerDB
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  3. rs117972960[chr17:2863069]
Enhancers that have rs117972960[chr17:2863069]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2849745 2866995 enh4215
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs117972960[chr17:2863069]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2863067 2863082 PRDM1 JASPAR yes 52789989
chr17 2863067 2863082 STAT2 JASPAR yes 52789990
chr17 2863068 2863082 STAT1 JASPAR yes 52789991
Genes associated with rs117972960[chr17:2863069], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More