EnhancerDB
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  3. rs11806436[chr1:8521238]
Enhancers that have rs11806436[chr1:8521238]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8493665 8545435 enh43
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 8520924 8521286 vista253
VISTA
Transcript factors that have rs11806436[chr1:8521238]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8519493 8522154 ZNF274 GTRD no Bone Marrow (K562) 107801977
chr1 8521231 8521241 ALX3 JASPAR yes 26557713
chr1 8521231 8521241 GSX2 JASPAR yes 26557714
chr1 8521231 8521241 MIXL1 JASPAR yes 26557715
chr1 8521231 8521241 MNX1 JASPAR yes 26557716
chr1 8521231 8521241 ALX3 JASPAR yes 118225525
chr1 8521231 8521241 GSX2 JASPAR yes 118225526
chr1 8521231 8521241 MIXL1 JASPAR yes 118225527
chr1 8521231 8521241 MNX1 JASPAR yes 118225528
chr1 8521232 8521240 ISX JASPAR yes 26557717
chr1 8521232 8521240 LMX1A JASPAR yes 26557718
chr1 8521232 8521240 LMX1B JASPAR yes 26557719
chr1 8521232 8521240 NKX6-1 JASPAR yes 26557720
chr1 8521232 8521240 NKX6-2 JASPAR yes 26557721
chr1 8521232 8521240 PRRX1 JASPAR yes 26557722
chr1 8521232 8521240 RAX2 JASPAR yes 26557723
chr1 8521232 8521240 SHOX JASPAR yes 26557724
chr1 8521232 8521240 UNCX JASPAR yes 26557725
chr1 8521232 8521240 VAX1 JASPAR yes 26557726
chr1 8521232 8521240 ISX JASPAR yes 118225529
chr1 8521232 8521240 LMX1A JASPAR yes 118225530
chr1 8521232 8521240 LMX1B JASPAR yes 118225531
chr1 8521232 8521240 NKX6-1 JASPAR yes 118225532
chr1 8521232 8521240 NKX6-2 JASPAR yes 118225533
chr1 8521232 8521240 PRRX1 JASPAR yes 118225534
chr1 8521232 8521240 RAX2 JASPAR yes 118225535
chr1 8521232 8521240 SHOX JASPAR yes 118225536
chr1 8521232 8521240 UNCX JASPAR yes 118225537
chr1 8521232 8521240 VAX1 JASPAR yes 118225538
Genes associated with rs11806436[chr1:8521238], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More