EnhancerDB
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  3. rs11806439[chr1:55038733]
Enhancers that have rs11806439[chr1:55038733]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs11806439[chr1:55038733]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55038732 55038746 GLIS2 JASPAR yes 28994132
chr1 55038732 55038746 ZIC1 JASPAR yes 28994133
chr1 55038732 55038747 ZIC3 JASPAR yes 28994134
chr1 55038732 55038747 ZIC4 JASPAR yes 28994135
Genes associated with rs11806439[chr1:55038733], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More