EnhancerDB
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  3. rs118078955[chr12:96847035]
Enhancers that have rs118078955[chr12:96847035]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96795782 96855361 enh14922
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs118078955[chr12:96847035]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96846992 96847449 ZNF143 GTRD no Epithelial (MCF-7) 21567785
chr12 96847022 96847043 IRF1 JASPAR yes 123073353
chr12 96847026 96847041 PRDM1 JASPAR yes 123073354
chr12 96847026 96847044 IRF2 JASPAR yes 123073355
chr12 96847030 96847045 IRF9 JASPAR yes 123073356
chr12 96847031 96847385 TCF7L2 GTRD no Colon (HCT116) 21567786
Genes associated with rs118078955[chr12:96847035], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More