EnhancerDB
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  3. rs11808829[chr1:27927062]
Enhancers that have rs11808829[chr1:27927062]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
chr1 27926949 27927449 vista936
VISTA
Transcript factors that have rs11808829[chr1:27927062]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27925913 27927142 TCF7L2 GTRD no Colon (HCT116) 107802601
chr1 27927053 27927068 TFAP2C JASPAR yes 27714849
chr1 27927053 27927068 TFAP2C JASPAR yes 118259034
chr1 27927059 27927065 PEA3 TRANSFAC yes 27714850
chr1 27927059 27927065 PEA3 TRANSFAC yes 118259035
chr1 27927061 27927071 NFKB1 JASPAR yes 27714851
chr1 27927061 27927071 NFKB1 JASPAR yes 118259036
Genes associated with rs11808829[chr1:27927062], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More