EnhancerDB
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  3. rs118152899[chr6:42259995]
Enhancers that have rs118152899[chr6:42259995]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42254359 42267679 enh38998
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs118152899[chr6:42259995]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42259982 42260001 RFX2 JASPAR yes 101705005
chr6 42259986 42260002 RFX2 JASPAR yes 101705006
chr6 42259986 42260002 RFX3 JASPAR yes 101705007
chr6 42259986 42260002 RFX4 JASPAR yes 101705008
chr6 42259986 42260002 RFX5 JASPAR yes 101705009
chr6 42259987 42260006 RFX2 JASPAR yes 101705010
Genes associated with rs118152899[chr6:42259995], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More