EnhancerDB
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  3. rs11854283[chr15:62421166]
Enhancers that have rs11854283[chr15:62421166]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 62394745 62423415 enh31435
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs11854283[chr15:62421166]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 62421146 62421166 ESR1 JASPAR yes 23882201
chr15 62421149 62421167 ESR2 JASPAR yes 23882204
chr15 62421151 62421166 ESR2 JASPAR yes 23882205
chr15 62421159 62421171 GRHL1 JASPAR yes 23882207
chr15 62421166 62421171 GATA1 TRANSFAC yes 23882208
Genes associated with rs11854283[chr15:62421166], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr15 62682725 63136830 + TLN2 ENSG00000171914.10 62682725 261559 Spleen 0.335903 13996