EnhancerDB
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  3. rs11861562[chr16:29285937]
Enhancers that have rs11861562[chr16:29285937]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29265834 29287135 enh31760
Astrocyte Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs11861562[chr16:29285937]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29285103 29285975 ZNF274 GTRD no Liver (HepG2) 21702117
chr16 29285103 29285975 ZNF274 GTRD no Liver (HepG2) 108191426
chr16 29285139 29286085 ZNF143 GTRD no Epithelial (MCF-7) 21702120
chr16 29285139 29286085 ZNF143 GTRD no Epithelial (MCF-7) 108191431
chr16 29285150 29285949 TCF7L2 GTRD no Colon (HCT116) 108191435
chr16 29285663 29285953 ZNF143 GTRD no Epithelial (MCF-7) 21702129
chr16 29285934 29285948 ONECUT3 JASPAR yes 10256885
chr16 29285936 29285945 SRY JASPAR yes 10256886
Genes associated with rs11861562[chr16:29285937], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More