EnhancerDB
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  3. rs11862113[chr16:85623220]
Enhancers that have rs11862113[chr16:85623220]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs11862113[chr16:85623220]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85623160 85623807 TCF7L2 GTRD no Colon (HCT116) 21730679
chr16 85623160 85623807 TCF7L2 GTRD no Colon (HCT116) 108216734
chr16 85623170 85623989 ZNF274 GTRD no Blood (GM12878) 108216735
chr16 85623170 85626962 TCF7L2 GTRD no Colon (HCT116) 21730680
chr16 85623170 85626962 TCF7L2 GTRD no Colon (HCT116) 108216736
chr16 85623190 85623939 ZNF143 GTRD no Epithelial (MCF-7) 21730681
chr16 85623190 85623939 ZNF143 GTRD no Epithelial (MCF-7) 108216737
chr16 85623195 85626254 ZNF143 GTRD no Epithelial (MCF-7) 21730682
chr16 85623195 85626254 ZNF143 GTRD no Epithelial (MCF-7) 108216738
chr16 85623209 85626541 ZNF143 GTRD no Epithelial (MCF-7) 21730683
chr16 85623209 85626541 ZNF143 GTRD no Epithelial (MCF-7) 108216739
chr16 85623218 85623238 TBX19 JASPAR yes 12080856
Genes associated with rs11862113[chr16:85623220], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More