EnhancerDB
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  3. rs11868004[chr17:55976622]
Enhancers that have rs11868004[chr17:55976622]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55962618 55979623 enh17245
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Thyroid Adrenal Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs11868004[chr17:55976622]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55976129 55976729 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274691
chr17 55976161 55976681 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274692
chr17 55976264 55976640 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274695
chr17 55976274 55976835 ZNF143 GTRD no Epithelial (MCF-7) 108274696
chr17 55976298 55976654 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21773831
chr17 55976298 55976654 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108274698
chr17 55976303 55976647 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274699
chr17 55976613 55976625 ZBTB7B JASPAR yes 54996736
chr17 55976614 55976634 RREB1 JASPAR yes 54996737
chr17 55976615 55976625 ZNF740 JASPAR yes 54996738
chr17 55976616 55976626 ZNF740 JASPAR yes 54996739
chr17 55976618 55976638 RREB1 JASPAR yes 54996740
chr17 55976621 55976636 RUNX2 JASPAR yes 54996741
chr17 55976622 55976632 RUNX3 JASPAR yes 54996742
chr17 55976622 55976633 RUNX1 JASPAR yes 54996743
Genes associated with rs11868004[chr17:55976622], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More