EnhancerDB
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  3. rs11879927[chr19:2539167]
Enhancers that have rs11879927[chr19:2539167]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs11879927[chr19:2539167]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2539155 2539170 STAT1 JASPAR yes 112071408
chr19 2539157 2539168 STAT1 JASPAR yes 112071409
chr19 2539158 2539173 FOXP1 JASPAR yes 112071410
chr19 2539161 2539172 FOXP2 JASPAR yes 112071411
chr19 2539162 2539170 FOXO3 JASPAR yes 112071412
chr19 2539163 2539170 FOXD2 JASPAR yes 112071413
chr19 2539163 2539170 FOXI1 JASPAR yes 112071414
chr19 2539163 2539170 FOXL1 JASPAR yes 112071415
chr19 2539163 2539170 FOXO4 JASPAR yes 112071416
chr19 2539163 2539170 FOXO6 JASPAR yes 112071417
chr19 2539163 2539170 FOXP3 JASPAR yes 112071418
chr19 2539163 2539171 FOXD1 JASPAR yes 112071419
chr19 2539163 2539171 FOXG1 JASPAR yes 112071420
chr19 2539163 2539171 FOXO3 JASPAR yes 112071421
chr19 2539163 2539172 SRY JASPAR yes 112071422
Genes associated with rs11879927[chr19:2539167], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More