EnhancerDB
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  3. rs11921988[chr3:152861016]
Enhancers that have rs11921988[chr3:152861016]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 152853205 152865539 enh36001
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs11921988[chr3:152861016]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 152861003 152861022 RFX2 JASPAR yes 6747457
chr3 152861005 152861020 RFX5 JASPAR yes 6747458
chr3 152861005 152861022 ESR1 JASPAR yes 6747459
chr3 152861007 152861023 RFX5 JASPAR yes 6747460
Genes associated with rs11921988[chr3:152861016], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More