EnhancerDB
  1. Home
  2. SNP
  3. rs11928652[chr3:16550205]
Enhancers that have rs11928652[chr3:16550205]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 16543630 16553835 enh87227
Stomach Blood (T-cell) Blood (GM12878)
chr3 16550067 16550455 vista40161
VISTA
Transcript factors that have rs11928652[chr3:16550205]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528470
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528471
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528472
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528473
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528474
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528475
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528476
chr3 16549978 16550493 EBF1 UCSC Txn Factor no Conserved 108528477
chr3 16550038 16550610 NFIC UCSC Txn Factor no Conserved 108528478
chr3 16550149 16550606 RUNX3 UCSC Txn Factor no Conserved 108528479
chr3 16550199 16550219 RREB1 JASPAR yes 736006
chr3 16550199 16550219 RREB1 JASPAR yes 70946947
chr3 16550201 16550221 RREB1 JASPAR yes 736007
chr3 16550201 16550221 RREB1 JASPAR yes 70946948
chr3 16550203 16550223 RREB1 JASPAR yes 736008
chr3 16550203 16550223 RREB1 JASPAR yes 70946949
chr3 16550205 16550225 RREB1 JASPAR yes 736009
chr3 16550205 16550225 RREB1 JASPAR yes 70946950
Genes associated with rs11928652[chr3:16550205], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More