EnhancerDB
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  3. rs11961978[chr6:138121279]
Enhancers that have rs11961978[chr6:138121279]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 138109536 138156015 enh23663
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr6 138121024 138121385 vista53753
VISTA
Transcript factors that have rs11961978[chr6:138121279]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 138120827 138121679 CTCF UCSC Txn Factor no Conserved 108541860
chr6 138121138 138121441 RAD21 UCSC Txn Factor no Conserved 108541861
chr6 138121146 138121429 SMC3 UCSC Txn Factor no Conserved 108541862
chr6 138121268 138121280 INSM1 JASPAR yes 70446788
chr6 138121268 138121280 INSM1 JASPAR yes 105677965
chr6 138121275 138121279 LFA1 TRANSFAC yes 70446789
chr6 138121275 138121279 LFA1 TRANSFAC yes 105677966
Genes associated with rs11961978[chr6:138121279], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More