EnhancerDB
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  3. rs12021669[chr1:225954461]
Enhancers that have rs12021669[chr1:225954461]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225938095 225960315 enh12725
Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 225954390 225955885 vista141
VISTA
Transcript factors that have rs12021669[chr1:225954461]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225954022 225954518 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21385821
chr1 225954022 225954518 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107686551
chr1 225954445 225954466 IRF1 JASPAR yes 35769497
chr1 225954445 225954466 IRF1 JASPAR yes 71159758
chr1 225954448 225954462 SPI1 JASPAR yes 35769498
chr1 225954448 225954462 SPI1 JASPAR yes 71159759
Genes associated with rs12021669[chr1:225954461], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More