EnhancerDB
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  3. rs12023552[chr1:204318094]
Enhancers that have rs12023552[chr1:204318094]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204298485 204322980 enh12579
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Ovary Esophagus Stomach Placenta Uterus Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
chr1 204317952 204318184 vista4679
VISTA
Transcript factors that have rs12023552[chr1:204318094]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204316940 204318157 ZNF274 GTRD no Cervix (HeLa-S3) 21370408
chr1 204316940 204318157 ZNF274 GTRD no Cervix (HeLa-S3) 107859861
chr1 204316986 204318121 ZNF274 GTRD no Cervix (HeLa-S3) 21370409
chr1 204316986 204318121 ZNF274 GTRD no Cervix (HeLa-S3) 107859862
chr1 204317697 204320975 AR GTRD no Prostate (PC-3) 21370410
chr1 204317697 204320975 AR GTRD no Prostate (PC-3) 107859863
chr1 204317723 204318133 GATA2 UCSC Txn Factor no Conserved 107859864
chr1 204317932 204318242 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21370411
chr1 204317932 204318242 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107859865
chr1 204318064 204322942 ZNF274 GTRD no Cervix (HeLa-S3) 21370412
chr1 204318064 204322942 ZNF274 GTRD no Cervix (HeLa-S3) 107859866
chr1 204318082 204321142 ZNF143 GTRD no Epithelial (MCF-7) 21370413
chr1 204318082 204321142 ZNF143 GTRD no Epithelial (MCF-7) 107859867
chr1 204318084 204318176 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107859868
chr1 204318088 204318106 NR3C1 JASPAR yes 34695877
chr1 204318088 204318106 NR3C1 JASPAR yes 118437915
chr1 204318089 204318101 TAL1 JASPAR yes 34695878
chr1 204318089 204318101 TAL1 JASPAR yes 118437916
chr1 204318091 204318101 MSC JASPAR yes 34695879
chr1 204318091 204318101 MSC JASPAR yes 118437917
Genes associated with rs12023552[chr1:204318094], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More