EnhancerDB
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  3. rs12025085[chr1:225955672]
Enhancers that have rs12025085[chr1:225955672]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225938095 225960315 enh12725
Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 225954390 225955885 vista141
VISTA
Transcript factors that have rs12025085[chr1:225955672]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225955220 225955844 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385833
chr1 225955304 225955848 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385834
chr1 225955386 225955722 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385836
chr1 225955397 225955787 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385837
chr1 225955400 225955790 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385838
chr1 225955421 225955761 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385839
chr1 225955427 225955943 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21385840
chr1 225955435 225955891 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385841
chr1 225955453 225955677 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385842
chr1 225955458 225955734 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385843
chr1 225955461 225955861 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385844
chr1 225955470 225955746 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385845
chr1 225955482 225955832 ZNF274 GTRD no Liver (HepG2) 21385846
chr1 225955483 225955773 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385847
chr1 225955491 225955771 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385848
chr1 225955527 225955817 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385849
chr1 225955605 225955815 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385850
chr1 225955660 225955681 REST JASPAR yes 35769694
chr1 225955660 225955681 REST JASPAR yes 71159955
chr1 225955662 225955677 HNF4A JASPAR yes 35769695
chr1 225955662 225955677 HNF4A JASPAR yes 71159956
chr1 225955666 225955676 RORA JASPAR yes 35769696
chr1 225955666 225955676 RORA JASPAR yes 71159957
chr1 225955667 225955678 ESRRA JASPAR yes 35769697
chr1 225955667 225955678 ESRRB JASPAR yes 35769698
chr1 225955667 225955678 ESRRA JASPAR yes 71159958
chr1 225955667 225955678 ESRRB JASPAR yes 71159959
chr1 225955669 225955677 NR4A2 JASPAR yes 35769699
chr1 225955669 225955677 NR4A2 JASPAR yes 71159960
chr1 225955671 225955675 ESR1 TRANSFAC yes 35769700
chr1 225955671 225955675 ESR1 TRANSFAC yes 71159961
Genes associated with rs12025085[chr1:225955672], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More