EnhancerDB
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  3. rs12025572[chr1:201690324]
Enhancers that have rs12025572[chr1:201690324]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201670008 201708415 enh12526
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12025572[chr1:201690324]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201690307 201690326 RFX2 JASPAR yes 34524340
chr1 201690311 201690327 RFX2 JASPAR yes 34524341
chr1 201690311 201690327 RFX3 JASPAR yes 34524342
chr1 201690311 201690327 RFX4 JASPAR yes 34524343
chr1 201690311 201690327 RFX5 JASPAR yes 34524344
chr1 201690312 201690331 RFX2 JASPAR yes 34524346
chr1 201690322 201690334 POU3F1 JASPAR yes 34524348
Genes associated with rs12025572[chr1:201690324], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More