EnhancerDB
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  3. rs12027548[chr1:94788768]
Enhancers that have rs12027548[chr1:94788768]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 94779785 94813175 enh12071
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12027548[chr1:94788768]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 94788212 94788781 ZNF143 GTRD no Epithelial (MCF-7) 107815549
chr1 94788323 94788863 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107815552
chr1 94788758 94788773 LEF1 JASPAR yes 30872976
chr1 94788763 94788769 SOX10 JASPAR yes 30872977
Genes associated with rs12027548[chr1:94788768], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More