EnhancerDB
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  3. rs12030020[chr1:223906672]
Enhancers that have rs12030020[chr1:223906672]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12030020[chr1:223906672]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223906658 223906673 TFAP2A JASPAR yes 35672040
chr1 223906658 223906673 TFAP2C JASPAR yes 35672041
chr1 223906662 223906674 TEAD1 JASPAR yes 35672042
chr1 223906664 223906674 TEAD1 JASPAR yes 35672043
chr1 223906664 223906674 TEAD4 JASPAR yes 35672044
chr1 223906665 223906673 TEAD3 JASPAR yes 35672045
Genes associated with rs12030020[chr1:223906672], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More