EnhancerDB
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  3. rs12039023[chr1:178633414]
Enhancers that have rs12039023[chr1:178633414]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178606845 178636895 enh759
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs12039023[chr1:178633414]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178632462 178633536 P63 GTRD no Skin (Keratinocyte) 21352892
chr1 178632652 178633587 P63 GTRD no Skin (Keratinocyte) 21352893
chr1 178632681 178633588 P63 GTRD no Skin (Keratinocyte) 21352894
chr1 178633394 178633415 IRF1 JASPAR yes 33435646
Genes associated with rs12039023[chr1:178633414], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More