EnhancerDB
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  3. rs12040962[chr1:8536901]
Enhancers that have rs12040962[chr1:8536901]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8493665 8545435 enh43
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12040962[chr1:8536901]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8536890 8536901 NFKB1 JASPAR yes 26559973
chr1 8536890 8536905 HSF1 JASPAR yes 26559974
chr1 8536891 8536904 HSF1 JASPAR yes 26559975
chr1 8536891 8536904 HSF2 JASPAR yes 26559976
chr1 8536891 8536904 HSF4 JASPAR yes 26559977
Genes associated with rs12040962[chr1:8536901], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More