EnhancerDB
  1. Home
  2. SNP
  3. rs12040964[chr1:184452184]
Enhancers that have rs12040964[chr1:184452184]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 184446505 184469333 enh12467
Brain (SK-N-MC) Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12040964[chr1:184452184]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 184452166 184452187 IRF1 JASPAR yes 33751234
chr1 184452171 184452189 IRF2 JASPAR yes 33751237
chr1 184452172 184452193 IRF1 JASPAR yes 33751238
chr1 184452174 184452189 PRDM1 JASPAR yes 33751239
chr1 184452176 184452190 IRF7 JASPAR yes 33751240
chr1 184452176 184452190 IRF8 JASPAR yes 33751241
chr1 184452176 184452191 IRF9 JASPAR yes 33751242
chr1 184452184 184452194 NKX2-3 JASPAR yes 33751243
Genes associated with rs12040964[chr1:184452184], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More