EnhancerDB
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  3. rs12042447[chr1:28735181]
Enhancers that have rs12042447[chr1:28735181]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28732865 28757735 enh186
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs12042447[chr1:28735181]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28735170 28735181 FOXB1 JASPAR yes 27766932
chr1 28735171 28735182 FOXB1 JASPAR yes 27766934
chr1 28735173 28735181 FOXL1 JASPAR yes 27766935
chr1 28735178 28735189 FOXC1 JASPAR yes 27766936
chr1 28735179 28735183 YY1 TRANSFAC yes 27766937
Genes associated with rs12042447[chr1:28735181], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More