EnhancerDB
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  3. rs12042879[chr1:178925780]
Enhancers that have rs12042879[chr1:178925780]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178892945 178926835 enh769
Epithelial (MCF-7) Large Intestine Ovary Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs12042879[chr1:178925780]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178925773 178925785 HES7 JASPAR yes 33457423
chr1 178925773 178925785 PKNOX1 JASPAR yes 33457424
chr1 178925773 178925785 PKNOX2 JASPAR yes 33457425
chr1 178925773 178925785 TGIF2 JASPAR yes 33457426
chr1 178925774 178925783 SNAI2 JASPAR yes 33457427
chr1 178925774 178925784 HEY2 JASPAR yes 33457428
chr1 178925774 178925784 ID4 JASPAR yes 33457429
chr1 178925774 178925784 TCF4 JASPAR yes 33457430
Genes associated with rs12042879[chr1:178925780], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More